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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16313862_16315443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16313862 - 16315443

Intron Length:

1582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

CTTTCCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AAATCCATAACT

Flanking Amino Acid:

NKYEIFYQCPDQMARNPSAI

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

58.4

46.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.5

0.75

0.7

81.6

23.4

Minor 5ss

33.9

-1.8

3.2

45.3

43.6

Minor BPS

69.8

0.7

1.6

82.31

37.9

Associated Gene:

Gene:

FBXO3

Ensembl Gene ID:

ENSAPLG00000006774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007049

16300880 - 16321914

21035