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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16328229_16330191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16328229 - 16330191

Intron Length:

1963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

AATTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTACTCTTAATC

Flanking Amino Acid:

TEDACLQMRFGKLRTSSCWK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.5

0.69

0.9

73.9

40.4

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

73.6

0.72

1.1

76.44

33.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044605

16326210 - 16331875

5666