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Intron Name: Anas_platyrhynchos_platyrhynchos_5_163387_164396_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

163387 - 164396

Intron Length:

1010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

TATTGCTTTATT

Flanking Amino Acid:

TDYQLDGFPFEEGMDTDKDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.8

33.6

Major BPS

69.2

0.48

1.3

71.9

Major PPT

88.6

0.87

0.6

84.3

23.6

Minor 5ss

40.6

-1.1

2.8

47.9

41.8

Minor BPS

59.8

0.39

2.1

80.78

41.1

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201