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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16342478_16343074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16342478 - 16343074

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGTGTTT

5'SS Class:

major

3'SS Sequence:

TTTTCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTCTTTTCATT

Flanking Amino Acid:

TQKNEELQKKNAELEAQRCR

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

68.4

38.9

Major BPS

100

1.24

0.5

100

Major PPT

91.2

0.93

0.7

89.3

26.1

Minor 5ss

35.9

-1.6

3.7

55.1

49.2

Minor BPS

53.9

0.2

1.7

73.2

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017780

16335382 - 16370128

34747