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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16343243_16343602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16343243 - 16343602

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGCATTCTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTCTTCTAATT

Flanking Amino Acid:

EILLPNEELKNELSIKESSL

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

67.6

0.4

1.1

67.4

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

57.2

0.3

1.6

75.99

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017780

16335382 - 16370128

34747