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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16345464_16345648_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16345464 - 16345648

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATCCCTTTATT

Flanking Amino Acid:

KSDASADLEQLLKALKQKLH

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.9

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

46.6

-0.3

2.5

61.6

43.3

Minor BPS

63.9

0.52

1.6

77.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017780

16335382 - 16370128

34747