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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16358665_16359019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16358665 - 16359019

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATACTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTTTTAATA

Flanking Amino Acid:

GEKFVHTEQKLNEVLKKCNV

Intron Amino Acid Position:

947

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.34

1.1

69.4

39.9

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

69.5

0.61

1.2

71.01

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017780

16335382 - 16370128

34747