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Intron Name: Anas_platyrhynchos_platyrhynchos_5_164418_169728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

164418 - 169728

Intron Length:

5311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTGTATTTAATT

Flanking Amino Acid:

RKRKGSSTDYQLDGFPFEEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

63.8

43.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

93.4

0.98

0.6

92.1

18.5

Minor 5ss

41.8

-0.9

2.8

54.9

43.3

Minor BPS

66.1

0.58

1.5

77.43

39.4

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201