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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16560190_16563043_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16560190 - 16563043

Intron Length:

2854

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCACATCAG

5'SS Class:

major

3'SS Sequence:

GCTGGGCTGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

AGCTCCTTCATG

Flanking Amino Acid:

LGEDAKRQQHSPGLGANKDP

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

57.7

46.4

Major BPS

0.62

1.1

77.2

Major PPT

44.1

-0.3

1.7

42.2

43.2

Minor 5ss

21.5

-3.3

3.8

31.4

42.8

Minor BPS

55.1

0.02

1.8

58.15

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006618

16556396 - 16777690

221295