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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16578027_16624375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16578027 - 16624375

Intron Length:

46349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAGA

5'SS Class:

major

3'SS Sequence:

TTTCTTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

GTATTGTTAAAT

Flanking Amino Acid:

VQCKPNESKPETRSDRTKKL

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.8

41.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

87.3

0.84

0.8

84.2

30.7

Minor 5ss

38.8

-1.3

2.8

49.6

46.2

Minor BPS

53.9

0.2

2.1

74.63

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006618

16556396 - 16777690

221295