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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16644966_16737502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16644966 - 16737502

Intron Length:

92537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGATCTAAAA

Flanking Amino Acid:

GLRTGDFLIEVNNENVVKVG

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.1

35.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

30.7

-2.2

3.7

46.1

49.1

Minor BPS

47.7

-0.1

66.28

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006618

16556396 - 16777690

221295