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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16766087_16777116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16766087 - 16777116

Intron Length:

11030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTACAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

CTGTGTCTAACT

Flanking Amino Acid:

TGTKTASLSTRSTEVMSTVS

Intron Amino Acid Position:

1272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

72.1

37.7

Major BPS

73.5

0.59

81.3

29.9

Major PPT

0.65

0.9

75.2

38.5

Minor 5ss

32.4

-2

3.2

41.3

45.2

Minor BPS

49.8

0.06

2.1

71.87

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006618

16556396 - 16777690

221295