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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16777099_16781051_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16777099 - 16781051

Intron Length:

3953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTCTGTTTA

5'SS Class:

weak_major

3'SS Sequence:

TTATGTGTATGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

CTGGCGATGATT

Flanking Amino Acid:

LTFCPQILIIFPLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.4

60.6

40.8

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

49.8

-0

1.8

62.8

47.1

Minor 5ss

47.3

-0.3

2.5

58.9

45.5

Minor BPS

-0.5

2.3

59.01

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032917

16777087 - 16781276

4190