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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16799170_16799766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16799170 - 16799766

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAC

U12 Branch Point Sequence:

AAACACTGAGTT

Flanking Amino Acid:

TAIALYDYQAAGDDEISFDP

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

52.2

0.06

1.1

Major PPT

78.6

0.64

0.8

69.3

36.9

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

43.9

-0.3

1.7

56.8

38.7

Associated Gene:

Gene:

CTTN

Ensembl Gene ID:

ENSAPLG00000005914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006208

16798970 - 16818290

19321