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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16799839_16800749_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16799839 - 16800749

Intron Length:

911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTGT

5'SS Class:

major

3'SS Sequence:

TCTCTCCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGATTTTAATT

Flanking Amino Acid:

VAGAGDHYQAEENAYDEYEN

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.7

43.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.5

0.57

0.7

73.9

24.3

Minor 5ss

36.4

-1.5

3.7

55.4

48.8

Minor BPS

64.9

0.55

1.2

74.15

37.3

Associated Gene:

Gene:

CTTN

Ensembl Gene ID:

ENSAPLG00000005914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006208

16798970 - 16818290

19321