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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16805048_16805350_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16805048 - 16805350

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTAATGTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATG

Flanking Amino Acid:

TYQKTKPIEAVANKTSSIRA

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

65.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.9

0.56

68.5

41.8

Minor 5ss

31.2

-2.2

3.3

38.7

40.9

Minor BPS

70.4

0.5

1.2

71.97

35.2

Associated Gene:

Gene:

CTTN

Ensembl Gene ID:

ENSAPLG00000005914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006208

16798970 - 16818290

19321