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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16806579_16809687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16806579 - 16809687

Intron Length:

3109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATCAG

5'SS Class:

major

3'SS Sequence:

ATCCTGCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACCTTTTTATCC

Flanking Amino Acid:

EKVQLHESQKDYSKGFGGKY

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

63.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.1

0.52

0.9

69.9

Minor 5ss

-1.2

2.9

47.2

Minor BPS

53.8

0.1

1.6

59.25

40.7

Associated Gene:

Gene:

CTTN

Ensembl Gene ID:

ENSAPLG00000005914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006208

16798970 - 16818290

19321