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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16825773_16826987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16825773 - 16826987

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTGACT

5'SS Class:

major

3'SS Sequence:

CTTCTTGGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

GCTTCTTGGAAT

Flanking Amino Acid:

SMQPKKMQIDGSVSGTQRLD

Intron Amino Acid Position:

1189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.1

63.3

40.4

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

64.3

0.32

61.5

38.9

Minor 5ss

41.2

-1

3.1

55.4

43.8

Minor BPS

0.18

1.6

69.55

41.4

Associated Gene:

Gene:

PPFIA1

Ensembl Gene ID:

ENSAPLG00000005058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005321

16825714 - 16879387

53674