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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16827154_16829630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16827154 - 16829630

Intron Length:

2477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ATCAATTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTTTATCAATT

Flanking Amino Acid:

VMGTDRRLDEDDDKSFRRAP

Intron Amino Acid Position:

1134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.2

26.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.41

62.1

42.4

Minor 5ss

42.2

-0.9

2.8

52.8

38.5

Minor BPS

57.5

0.32

1.8

78.05

38.2

Associated Gene:

Gene:

PPFIA1

Ensembl Gene ID:

ENSAPLG00000005058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005321

16825714 - 16879387

53674