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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16829700_16830127_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16829700 - 16830127

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTAAACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTTGTTTTACT

Flanking Amino Acid:

LLQIPTQNTQARAVLEREFN

Intron Amino Acid Position:

1111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

75.1

36.6

Major BPS

68.8

0.47

1.2

63.4

Major PPT

64.7

0.33

60.5

40.2

Minor 5ss

30.5

-2.2

3.3

39.1

46.3

Minor BPS

63.9

0.52

2.1

87.77

37.8

Associated Gene:

Gene:

PPFIA1

Ensembl Gene ID:

ENSAPLG00000005058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005321

16825714 - 16879387

53674