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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16832088_16832164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16832088 - 16832164

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TCTTCTCTAAAC

Flanking Amino Acid:

GQLKMVDSFHRNSFQCGIMC

Intron Amino Acid Position:

1019

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

73.5

0.53

0.9

69.9

34.3

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

60.2

0.3

1.8

72.18

38.9

Associated Gene:

Gene:

PPFIA1

Ensembl Gene ID:

ENSAPLG00000005058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005321

16825714 - 16879387

53674