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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16851491_16853686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16851491 - 16853686

Intron Length:

2196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGTTA

5'SS Class:

major

3'SS Sequence:

TATTTTGTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

AGTAACATAATT

Flanking Amino Acid:

KERMAALEDKNSLIREIENA

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

75.7

36.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

82.6

0.73

0.8

81.5

35.9

Minor 5ss

45.9

-0.4

3.2

64.4

Minor BPS

50.2

0.08

1.8

70.58

39.7

Associated Gene:

Gene:

PPFIA1

Ensembl Gene ID:

ENSAPLG00000005058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005321

16825714 - 16879387

53674