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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16857469_16857710_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16857469 - 16857710

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAACCA

5'SS Class:

major

3'SS Sequence:

TCCTGTTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TCCTGTTTAATA

Flanking Amino Acid:

QENTPTTNGKRSSDGSLCHD

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.6

40.5

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

72.3

0.5

0.9

68.9

35.9

Minor 5ss

30.2

-2.3

3.3

39.8

45.7

Minor BPS

59.1

0.28

1.8

66.01

41.8

Associated Gene:

Gene:

PPFIA1

Ensembl Gene ID:

ENSAPLG00000005058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005321

16825714 - 16879387

53674