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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16858311_16859195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16858311 - 16859195

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGAAA

5'SS Class:

major

3'SS Sequence:

ATGATCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

ATTGTTTCAAAT

Flanking Amino Acid:

FEHHKALDEKVRERLRVALE

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

74.9

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

0.56

0.9

70.6

40.4

Minor 5ss

37.1

-1.5

3.1

48.1

47.6

Minor BPS

0.11

1.7

71.21

39.9

Associated Gene:

Gene:

PPFIA1

Ensembl Gene ID:

ENSAPLG00000005058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005321

16825714 - 16879387

53674