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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16860117_16879123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16860117 - 16879123

Intron Length:

19007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATGTACTTATAT

Flanking Amino Acid:

QRQLNTALPQEFAALTKELN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.1

40.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

80.7

0.69

0.9

78.1

40.1

Minor 5ss

-0.9

3.1

56.4

Minor BPS

53.1

0.17

1.9

72.94

43.4

Associated Gene:

Gene:

PPFIA1

Ensembl Gene ID:

ENSAPLG00000005058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005321

16825714 - 16879387

53674