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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16920340_16921821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16920340 - 16921821

Intron Length:

1482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTATGGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TCATTCTCTACT

Flanking Amino Acid:

GIGKLAVIINAFVISFTSDF

Intron Amino Acid Position:

821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

66.4

0.37

65.4

40.8

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

53.5

0.19

1.9

72.58

44.1

Associated Gene:

Gene:

ANO1

Ensembl Gene ID:

ENSAPLG00000004437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026662

16916959 - 16944294

27336

ENSAPLT00000004623

16916959 - 16962380

45422

ENSAPLT00000028657

16920139 - 16957900

37762