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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16924972_16925679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16924972 - 16925679

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CATTGTGTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCTGTATGAACT

Flanking Amino Acid:

PIFYVAFFKGRFVGRPGDYV

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

77.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

66.3

0.37

57.7

42.9

Minor 5ss

31.1

-2.2

2.7

37.5

40.1

Minor BPS

52.3

0.15

1.8

73.4

43.4

Associated Gene:

Gene:

ANO1

Ensembl Gene ID:

ENSAPLG00000004437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026662

16916959 - 16944294

27336

ENSAPLT00000004623

16916959 - 16962380

45422

ENSAPLT00000028657

16920139 - 16957900

37762