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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1692734_1695686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1692734 - 1695686

Intron Length:

2953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTAT

5'SS Class:

strong_major

3'SS Sequence:

CAATACTCTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TCTTACTGATTT

Flanking Amino Acid:

ALGESEWFPQLHRIMQLSVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

85.9

25.1

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

65.9

0.36

0.9

58.4

37.6

Minor 5ss

41.9

-0.9

2.9

58.4

46.2

Minor BPS

51.6

0.13

1.9

73.75

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025002

1692647 - 1720953

28307