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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16937375_16938446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16937375 - 16938446

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTGCTTTTCACA

Flanking Amino Acid:

GCATVDENIPSMEMCDQRNN

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.4

38.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

33.1

-1.9

2.9

41.1

44.9

Minor BPS

54.8

0.14

1.7

67.7

39.3

Associated Gene:

Gene:

ANO1

Ensembl Gene ID:

ENSAPLG00000004437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028657

16920139 - 16957900

37762

ENSAPLT00000026662

16916959 - 16944294

27336

ENSAPLT00000004623

16916959 - 16962380

45422