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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16942447_16944114_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16942447 - 16944114

Intron Length:

1668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

VYSAAYPLHDGDYEGENVEP

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

27.9

Major BPS

69.8

0.49

37.5

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

36.8

-1.5

3.4

53.7

43.8

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

ANO1

Ensembl Gene ID:

ENSAPLG00000004437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004623

16916959 - 16962380

45422

ENSAPLT00000028657

16920139 - 16957900

37762

ENSAPLT00000026662

16916959 - 16944294

27336