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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16951162_16952257_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16951162 - 16952257

Intron Length:

1096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGACATTTTATT

Flanking Amino Acid:

FLKLKMPTKKMYQINQTHGL

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

69.7

41.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

80.8

0.69

0.8

74.3

30.8

Minor 5ss

39.1

-1.2

51.7

Minor BPS

47.3

-0.1

1.8

63.98

40.4

Associated Gene:

Gene:

ANO1

Ensembl Gene ID:

ENSAPLG00000004437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028657

16920139 - 16957900

37762

ENSAPLT00000004623

16916959 - 16962380

45422