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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1695789_1696932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1695789 - 1696932

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTGC

5'SS Class:

major

3'SS Sequence:

TTTTGTGATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCATTCTTATCC

Flanking Amino Acid:

LEDGWDITAQVVSLVQLLSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

66.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

73.6

0.53

66.6

44.3

Minor 5ss

45.9

-0.4

2.8

59.2

39.8

Minor BPS

64.6

0.44

1.6

70.52

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025002

1692647 - 1720953

28307