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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16957923_16962354_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16957923 - 16962354

Intron Length:

4432

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCAGGACAT

5'SS Class:

major

3'SS Sequence:

CAGACGACCTCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTTCTGCCAGA

Flanking Amino Acid:

REELGGPKNEAPDETGMR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

62.2

42.2

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

53.7

0.08

47.6

39.9

Minor 5ss

23.6

-3

4.2

38.5

40.9

Minor BPS

-0.7

2.6

62.68

44.2

Associated Gene:

Gene:

ANO1

Ensembl Gene ID:

ENSAPLG00000004437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004623

16916959 - 16962380

45422