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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1707074_1709008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1707074 - 1709008

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTCTTTCAAAT

Flanking Amino Acid:

NYLFAPTEIEALKPNVSMSS

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

88.1

28.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

72.6

0.51

0.9

70.7

33.9

Minor 5ss

45.1

-0.5

3.1

44.3

Minor BPS

58.5

0.35

1.6

78.7

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025002

1692647 - 1720953

28307