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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17172802_17172889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17172802 - 17172889

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCAG

5'SS Class:

major

3'SS Sequence:

TGTGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGAAA

U12 Branch Point Sequence:

GCGTCAGAAACC

Flanking Amino Acid:

MFEEIVMAEHRFHGEGYQEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.5

45.8

Major BPS

46.5

-0.2

1.4

52.2

39.8

Major PPT

0.5

65.5

Minor 5ss

28.7

-2.4

3.4

37.1

47.5

Minor BPS

41.5

-0.6

2.4

51.7

45.3

Associated Gene:

Gene:

LTO1

Ensembl Gene ID:

ENSAPLG00000004024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004136

17172707 - 17176939

4233