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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17176569_17176870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17176569 - 17176870

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTAAG

5'SS Class:

major

3'SS Sequence:

ATTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCATGTATT

Flanking Amino Acid:

LEKIRGKFKQVCSMLNIQSD

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

71.7

39.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

86.2

0.81

0.7

85.3

28.6

Minor 5ss

37.5

-1.4

2.4

42.3

44.5

Minor BPS

49.1

0.01

2.1

73.93

42.7

Associated Gene:

Gene:

LTO1

Ensembl Gene ID:

ENSAPLG00000004024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004136

17172707 - 17176939

4233