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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17251_19356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17251 - 19356

Intron Length:

2106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTGGCTTTTACA

Flanking Amino Acid:

GLPAARKHLNKLRNIRYGFN

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

75.9

0.58

0.7

74.2

24.1

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

59.8

0.3

1.8

70.62

41.9

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307

ENSAPLT00000005315

16966 - 51974

35009