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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17279697_17292311_R

Intron Information:

Intron Rank:

129068

Intron Class:

major

Intron Phase:

Intron Coordinates:

17279697 - 17292311

Intron Length:

12615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TGCTTCTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

85.6

0.8

77.3

35.9

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

60.6

0.41

1.7

75.64

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045454

17278614 - 17298168

19555