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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17499184_17501519_R

Intron Information:

Intron Rank:

140686

Intron Class:

major

Intron Phase:

Intron Coordinates:

17499184 - 17501519

Intron Length:

2336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTTTA

5'SS Class:

major

3'SS Sequence:

TGTCCTTGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TCCCCCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

74.2

32.1

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

0.54

0.9

72.6

37.5

Minor 5ss

40.5

-1.1

54.7

43.6

Minor BPS

60.8

0.42

1.6

72.9

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024487

17498669 - 17506581

7913