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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17502353_17506345_R

Intron Information:

Intron Rank:

140687

Intron Class:

major

Intron Phase:

Intron Coordinates:

17502353 - 17506345

Intron Length:

3993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTATT

5'SS Class:

major

3'SS Sequence:

TCTTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

GTTGCAATGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.2

38.1

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

87.1

0.83

0.8

84.6

30.3

Minor 5ss

46.1

-0.4

2.9

68.9

41.7

Minor BPS

47.5

-0.1

70.09

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024487

17498669 - 17506581

7913