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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17514008_17519279_R

Intron Information:

Intron Rank:

148498

Intron Class:

major

Intron Phase:

Intron Coordinates:

17514008 - 17519279

Intron Length:

5272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGTCCCTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

81.6

0.71

0.9

77.8

35.3

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

82.5

1.1

90.65

32.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018968

17513744 - 17519520

5777

ENSAPLT00000019662

17513744 - 17522088

8345