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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17539387_17549459_R

Intron Information:

Intron Rank:

146382

Intron Class:

major

Intron Phase:

Intron Coordinates:

17539387 - 17549459

Intron Length:

10073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTGGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TGTAGTCTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.9

34.5

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

71.1

0.47

1.1

64.5

45.9

Minor 5ss

44.6

-0.6

2.5

57.8

40.7

Minor BPS

44.9

-0.5

2.1

53.3

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034124

17539092 - 17549738

10647