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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17559840_17566539_R

Intron Information:

Intron Rank:

146386

Intron Class:

major

Intron Phase:

Intron Coordinates:

17559840 - 17566539

Intron Length:

6700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTATGTAGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

88.4

0.86

0.7

83.2

Minor 5ss

-1.1

2.9

57.4

41.1

Minor BPS

47.2

-0.1

2.4

75.05

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035179

17559572 - 17567760

8189

ENSAPLT00000034996

17549409 - 17566699

17291