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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17615320_17616948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17615320 - 17616948

Intron Length:

1629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TAGCCTTTAATT

Flanking Amino Acid:

VNLFVALLLENFIHKWDRRC

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

85.2

0.79

0.9

77.1

41.6

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

71.2

0.74

1.2

78.45

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003563

17610764 - 17642712

31949