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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17617992_17618115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17617992 - 17618115

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TTGTGTTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

TCTGTTTTACTT

Flanking Amino Acid:

YWPNNFDDFAAAVVTLWDVM

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

45.2

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

79.4

0.66

77.7

40.7

Minor 5ss

40.7

-1

3.1

60.3

43.9

Minor BPS

53.3

0.18

1.7

69.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003563

17610764 - 17642712

31949