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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17648103_17648822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17648103 - 17648822

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGGGC

5'SS Class:

major

3'SS Sequence:

TGTGTGATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

CTGTGTGTGATT

Flanking Amino Acid:

VDGQVSQTDEADMGMTYAEL

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

65.1

40.9

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

73.8

0.54

66.4

Minor 5ss

29.6

-2.3

3.5

41.6

45.1

Minor BPS

43.2

-0.4

2.3

61.34

Associated Gene:

Gene:

NADSYN1

Ensembl Gene ID:

ENSAPLG00000003062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019982

17645374 - 17662887

17514

ENSAPLT00000003162

17644520 - 17662887

18368

ENSAPLT00000020060

17643781 - 17663646

19866