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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17651968_17652343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17651968 - 17652343

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGATT

5'SS Class:

major

3'SS Sequence:

GAATTCTTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TCTGTTTGAATT

Flanking Amino Acid:

RAKLLAEQIGSYHINLNIDA

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

75.8

39.8

Major BPS

74.6

0.61

1.4

34.5

Major PPT

67.7

0.4

1.1

66.1

44.7

Minor 5ss

36.2

-1.6

3.7

56.4

Minor BPS

56.2

0.27

1.5

71.39

40.7

Associated Gene:

Gene:

NADSYN1

Ensembl Gene ID:

ENSAPLG00000003062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020060

17643781 - 17663646

19866

ENSAPLT00000019982

17645374 - 17662887

17514

ENSAPLT00000003162

17644520 - 17662887

18368