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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17653240_17653909_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17653240 - 17653909

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TATTTTTGAATT

Flanking Amino Acid:

LWDYLRRSKQAGFLLPLSGG

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

76.6

0.6

74.9

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

0.64

1.3

81.42

34.1

Associated Gene:

Gene:

NADSYN1

Ensembl Gene ID:

ENSAPLG00000003062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019982

17645374 - 17662887

17514

ENSAPLT00000003162

17644520 - 17662887

18368

ENSAPLT00000020060

17643781 - 17663646

19866