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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17655412_17656790_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17655412 - 17656790

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATACTTA

5'SS Class:

weak_major

3'SS Sequence:

GTTTTCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GTTTTCTTCTCA

Flanking Amino Acid:

VDLVNSATAKNGGIYILSNQ

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

36.8

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

86.3

0.82

0.7

84.7

30.2

Minor 5ss

60.1

0.34

2.5

Minor BPS

44.2

-0.4

3.6

71.41

40.9

Associated Gene:

Gene:

NADSYN1

Ensembl Gene ID:

ENSAPLG00000003062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020060

17643781 - 17663646

19866

ENSAPLT00000019982

17645374 - 17662887

17514

ENSAPLT00000003162

17644520 - 17662887

18368