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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17656909_17658763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17656909 - 17658763

Intron Length:

1855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

TCTGATTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTGATTTGACA

Flanking Amino Acid:

EICEELWAPNSPHIEMGLDG

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

72.5

0.51

1.1

68.1

42.1

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

0.18

1.6

66.68

40.2

Associated Gene:

Gene:

NADSYN1

Ensembl Gene ID:

ENSAPLG00000003062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020060

17643781 - 17663646

19866

ENSAPLT00000019982

17645374 - 17662887

17514

ENSAPLT00000003162

17644520 - 17662887

18368